STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202045_01761Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_001202045_01762
Unannotated protein.
 0.999
GCA_001202045_01763
Unannotated protein.
 
 0.997
GCA_001202045_03062
Unannotated protein.
 0.996
GCA_001202045_03285
Unannotated protein.
 0.996
GCA_001202045_01252
Unannotated protein.
 
  
  0.972
GCA_001202045_00934
Unannotated protein.
 0.954
GCA_001202045_03286
Unannotated protein.
 
0.916
GCA_001202045_01760
Unannotated protein.
 
  
  0.886
GCA_001202045_01454
Unannotated protein.
 
 
 0.860
GCA_001202045_02527
Unannotated protein.
 
 
 0.849
Your Current Organism:
Pseudorhodobacter ferrugineus
NCBI taxonomy Id: 77008
Other names: ATCC 25652, Agrobacterium ferrugineum, CIP 105952, DSM 5888, IAM 12616, IFO 15767, JCM 20687, NBRC 15767, P. ferrugineus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.