STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202045_01901Unannotated protein. (657 aa)    
Predicted Functional Partners:
GCA_001202045_01902
Unannotated protein.
 
  
 0.992
GCA_001202045_02043
Unannotated protein.
 
  
 0.984
GCA_001202045_01729
Unannotated protein.
 
 
 0.956
GCA_001202045_02986
Unannotated protein.
 
 
 0.954
GCA_001202045_02045
Unannotated protein.
 
  
 0.890
GCA_001202045_02046
Unannotated protein.
 
  
 0.877
GCA_001202045_01903
Unannotated protein.
       0.731
GCA_001202045_02047
Unannotated protein.
 
   
 0.691
GCA_001202045_00259
Unannotated protein.
 
  
 0.619
GCA_001202045_02044
Unannotated protein.
  
  
 0.597
Your Current Organism:
Pseudorhodobacter ferrugineus
NCBI taxonomy Id: 77008
Other names: ATCC 25652, Agrobacterium ferrugineum, CIP 105952, DSM 5888, IAM 12616, IFO 15767, JCM 20687, NBRC 15767, P. ferrugineus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.