STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202045_03250Unannotated protein. (909 aa)    
Predicted Functional Partners:
GCA_001202045_03251
Unannotated protein.
 
     0.945
GCA_001202045_03252
Unannotated protein.
 
     0.944
GCA_001202045_03249
Unannotated protein.
 
  
  0.929
GCA_001202045_01899
Unannotated protein.
   
 0.865
GCA_001202045_00772
Unannotated protein.
    
 
 0.810
GCA_001202045_01521
Unannotated protein.
    
 0.798
GCA_001202045_00179
Unannotated protein.
     
 0.664
GCA_001202045_00260
Unannotated protein.
     
 0.664
GCA_001202045_02022
Unannotated protein.
    
 0.613
GCA_001202045_03097
Unannotated protein.
    
 0.613
Your Current Organism:
Pseudorhodobacter ferrugineus
NCBI taxonomy Id: 77008
Other names: ATCC 25652, Agrobacterium ferrugineum, CIP 105952, DSM 5888, IAM 12616, IFO 15767, JCM 20687, NBRC 15767, P. ferrugineus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.