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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0310Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
Malapachy_2417
Endoplasmic reticulum insertion protein sec61.
   
 
 0.794
Malapachy_3721
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.745
Malapachy_3819
Protein transport protein sec61 subunit gamma.
    
   0.733
Malapachy_2223
60s ribosomal protein l5.
   
   0.724
Malapachy_3338
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.720
Malapachy_3536
60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
   
   0.715
Malapachy_1503
Uncharacterized protein.
   
   0.709
Malapachy_0020
60s ribosomal protein l38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.708
Malapachy_0350
60s ribosomal protein l13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.705
Malapachy_1193
60s ribosomal protein l21.
   
   0.702
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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