STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0192Pre-mrna-splicing factor prp46. (483 aa)    
Predicted Functional Partners:
Malapachy_1436
Cwf15 cwc15 cell cycle control protein.
   
 0.999
Malapachy_3651
Nuclear matrix protein.
   
0.999
Malapachy_4132
Cef1-required during g2 m transition.
   
 0.999
Malapachy_0538
Breast carcinoma amplified sequence 2.
   
 0.999
Malapachy_2644
DUF1716 domain-containing protein.
   
 0.997
Malapachy_1418
Pre-mrna-splicing factor clf1.
   
 
 0.990
Malapachy_1473
Pre-mrna-processing protein 45.
   
 
 0.989
Malapachy_0803
Maternal g10 transcript.
   
 
 0.989
Malapachy_1463
Uncharacterized protein.
    
 
 0.988
Malapachy_1186
Spliceosome complex protein.
   
 
 0.988
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.