STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0275WLM domain-containing protein. (236 aa)    
Predicted Functional Partners:
Malapachy_2579
Small ubiquitin-related modifier.
    
 
 0.754
Malapachy_1770
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 
 0.601
Malapachy_2449
Dna topoisomerase i.
    
 
 0.556
Malapachy_2145
Sumo deconjugating cysteine peptidase ulp2.
    
 
 0.531
Malapachy_0591
Sentrin-specific protease 1.
    
 
 0.419
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.