STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_13992-amino-3-ketobutyrate ligase. (548 aa)    
Predicted Functional Partners:
Malapachy_0417
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.990
Malapachy_3614
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.872
Malapachy_1337
Microtubule associated protein.
    
 
 0.867
Malapachy_1647
Cytoplasmic dynein heavy chain 1.
    
 0.865
Malapachy_1667
Dynein heavy chain protein 1.
    
 0.865
Malapachy_2074
Mitotic spindle checkpoint component mad2.
   
 0.853
Malapachy_2909
Eb1-like protein.
   
 
 0.850
Malapachy_1952
Dynein intermediate chain.
    
 0.838
Malapachy_0678
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.801
Malapachy_3279
T-complex protein alpha subunit (Tcp-1-alpha).
   
 0.799
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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