STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1704Dead-domain-containing protein; Belongs to the DEAD box helicase family. (396 aa)    
Predicted Functional Partners:
Malapachy_1917
Rna-binding domain-containing protein.
   
 0.998
Malapachy_2540
Mago nashi.
   
 0.996
Malapachy_2822
Mif4g-domain-containing protein.
    
 0.995
Malapachy_1172
Rna-binding protein with serine-rich domain 1-like protein.
   
 0.992
Malapachy_0069
Essential component of the nuclear pore which mediates nuclear import and export.
    
 0.978
Malapachy_2010
RanBD1 domain-containing protein.
    
 0.978
Malapachy_3680
Essential component of the nuclear pore which mediates nuclear import and export.
    
 0.978
Malapachy_2112
Atp-dependent rna helicase prh1.
   
 0.978
Malapachy_1214
Uncharacterized protein.
   
 0.975
Malapachy_2866
Nonsense-mediated decay protein upf3.
   
 0.969
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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