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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1972Kin17_mid domain-containing protein. (330 aa)    
Predicted Functional Partners:
Malapachy_4220
Protein phosphatase 2c.
   
   0.788
Malapachy_2536
Splicing factor 3a subunit 2.
    
 
 0.761
Malapachy_3530
Uncharacterized protein.
    
 0.756
Malapachy_2514
Splicing factor 3b subunit 1.
    
   0.751
Malapachy_1872
Splicing factor 3b subunit 3.
    
   0.751
Malapachy_1715
Rna splicing factor prp9.
    
 
 0.735
Malapachy_0107
Pre-mrna-splicing factor 38a.
   
   0.701
Malapachy_1895
Uncharacterized protein.
   
   0.700
Malapachy_3752
Pre-mrna splicing factor.
   
   0.680
Malapachy_1750
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.674
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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