STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_06432-nitropropane dioxygenase. (381 aa)    
Predicted Functional Partners:
Malapachy_4140
Cyb2-l-lactate dehydrogenase (Cytochrome b2).
  
 0.656
Malapachy_0529
Acyl-dehydrogenase.
     
 0.618
Malapachy_3498
Cytochrome b5; Belongs to the cytochrome b5 family.
    
  0.610
Malapachy_1796
Tether containing ubx domain for glut4.
    
  0.523
Malapachy_2772
Uncharacterized protein.
   
 
 0.513
Malapachy_0573
C6 finger domain.
   
 
 0.513
Malapachy_0621
Gdp-mannose transporter.
 
    
 0.509
Malapachy_0939
Protease iv.
    
 0.495
Malapachy_3460
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.495
Malapachy_1857
Mrna 3-end-processing protein rna14.
     
 0.440
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.