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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0774Vps4-vacuolar sorting protein; Belongs to the AAA ATPase family. (436 aa)    
Predicted Functional Partners:
Malapachy_0197
Snf7 protein.
    
 0.993
Malapachy_2593
Vacuolar assembly protein did2.
   
 0.992
Malapachy_0158
Vps20-vaculolar protein sorting.
    
 0.990
Malapachy_1354
Snf7-domain-containing protein.
    
 0.990
Malapachy_1175
Vps60 involved in vacuolar protein sorting.
   
 0.980
Malapachy_1107
Uncharacterized protein.
   
 0.977
Malapachy_0800
Vacuolar sorting protein vps24.
   
 0.921
Malapachy_0940
Bro1-domain-containing protein.
   
 0.840
Malapachy_3716
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.790
Malapachy_2864
Snf7-domain-containing protein.
   
 0.770
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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