STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4081Dad4-outer kinetochore protein (Part of dam1 complex). (84 aa)    
Predicted Functional Partners:
Malapachy_2793
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.984
Malapachy_1412
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.961
Malapachy_1995
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.901
Malapachy_3225
Mitotic spindle biogenesis protein spc19.
    
 0.870
Malapachy_3339
Methylenetetrahydrofolate dehydrogenase (Nad+).
  
 
 0.857
Malapachy_0529
Acyl-dehydrogenase.
  
 0.846
Malapachy_2039
D-amino-acid oxidase.
  
 0.828
Malapachy_2875
Dash complex subunit dad2.
    
 0.819
Malapachy_4106
Dash complex subunit dam1.
    
 0.790
Malapachy_1539
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.783
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.