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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4180Arm repeat-containing protein. (929 aa)    
Predicted Functional Partners:
Malapachy_1075
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.957
Malapachy_4166
Uncharacterized protein.
    
 
 0.880
Malapachy_3396
Heterogeneous nuclear ribonucleoprotein hrp1.
    
 
 0.872
Malapachy_0090
Arm repeat-containing protein.
   
 
0.858
Malapachy_3522
Nucleoporin.
   
 0.797
Malapachy_0570
Arm repeat-containing protein.
   
 
 0.721
Malapachy_0069
Essential component of the nuclear pore which mediates nuclear import and export.
   
 
 0.712
Malapachy_2010
RanBD1 domain-containing protein.
   
 
 0.712
Malapachy_3680
Essential component of the nuclear pore which mediates nuclear import and export.
   
 
 0.712
Malapachy_3278
Crm1-nuclear export exportin.
   
 
 0.672
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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