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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Malapachy_1063Dna-directed rna polymerase iii subunit rpc5. (273 aa)    
Predicted Functional Partners:
Malapachy_4121
Rpc53-47 kd subunit of dna-directed rna polymerase iii.
   
 0.998
Malapachy_2338
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.994
Malapachy_3383
Rpc40-40 kd subunit of dna-directed rna polymerases i and iii.
   
 0.993
Malapachy_0004
Polymerase iii polypeptide h.
   
 0.992
Malapachy_0896
Dna-directed rna polymerase iii subunit rpc9.
   
 0.992
Malapachy_2432
Dna-directed rna polymerase subunit.
   
 0.991
Malapachy_1559
Dna-directed rna polymerase.
   
 0.991
Malapachy_2465
Rpc34-dna-directed rna polymerase 34 kd subunit.
   
 0.989
Malapachy_1882
Rpo26-18kd subunit of dna-directed rna polymerases iii.
   
 0.988
Malapachy_2282
Rpb5 subunit of dna-directed rna polymerase.
   
 0.988
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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