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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2335Chromatin structure-remodeling complex subunit rsc9. (756 aa)    
Predicted Functional Partners:
Malapachy_0244
Snf5-domain-containing protein.
    
 
 0.804
Malapachy_2784
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.701
Malapachy_0869
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.701
Malapachy_1645
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.701
Malapachy_2756
Histone H3; Belongs to the histone H3 family.
    
 0.692
Malapachy_1540
Histone-fold-containing protein.
    
 0.692
Malapachy_1909
Histone H3; Belongs to the histone H3 family.
    
 0.692
Malapachy_0805
Uncharacterized protein.
    
 0.691
Malapachy_2174
Hist_deacetyl domain-containing protein.
    
 0.691
Malapachy_3978
Act1-actin; Belongs to the actin family.
    
 
 0.676
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.