STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0513Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
Malapachy_2560
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.889
Malapachy_2866
Nonsense-mediated decay protein upf3.
   
 0.878
Malapachy_1917
Rna-binding domain-containing protein.
    
 0.828
Malapachy_3367
Uncharacterized protein.
    
 0.827
Malapachy_3558
Atp dependent helicase.
    
 0.827
Malapachy_0717
Nuclear cap-binding protein subunit 2.
   
 0.773
Malapachy_2637
Ngr1 protein.
    
 0.717
Malapachy_0383
Mrna-decapping enzyme 1b.
    
 0.709
Malapachy_1380
Arm repeat-containing protein.
   
 0.702
Malapachy_1736
Rrp6-exonuclease component of the nuclear exosome.
    
 0.697
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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