STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0464Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (761 aa)    
Predicted Functional Partners:
Malapachy_3241
Protein transport protein sec24c.
   
 0.999
Malapachy_2687
Protein transporter sec24.
   
0.999
Malapachy_2954
Protein transport protein.
   
 0.998
Malapachy_1479
Wd40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.998
Malapachy_2544
Protein transport protein sec22; Belongs to the synaptobrevin family.
   
 0.998
Malapachy_1659
Gtp-binding protein sar1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.990
Malapachy_1379
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.978
Malapachy_2456
Sodium pantothenate symporter.
   
 0.957
Malapachy_3235
60s ribosomal protein l12; Belongs to the universal ribosomal protein uL11 family.
 
      0.900
Malapachy_0763
Uncharacterized protein.
    
 0.870
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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