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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4030Trna nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (610 aa)    
Predicted Functional Partners:
Malapachy_0487
25S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family.
   
 0.768
Malapachy_1370
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
      0.512
Malapachy_3898
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.508
Malapachy_1029
Rnb-domain-containing protein; Belongs to the RNR ribonuclease family.
  
 0.506
Malapachy_3263
Heat repeat protein.
    
 
 0.485
Malapachy_0455
Ssd1 protein.
  
 0.482
Malapachy_2034
RNB domain-containing protein.
  
 0.469
Malapachy_0166
Bpl1-biotin holocarboxylase synthetase.
  
  
 0.464
Malapachy_0073
Actin-like protein arp6; Belongs to the actin family.
   
   0.453
Malapachy_4016
Dolichyl pyrophosphate (Dol-P-P) phosphatase.
  
  
 0.436
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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