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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2713Structural maintenance of chromosomes protein. (1222 aa)    
Predicted Functional Partners:
Malapachy_1782
Double-strand-break repair protein rad21.
   
 0.999
Malapachy_2855
Nuclear cohesin complex subunit.
   
 0.999
Malapachy_4258
Structural maintenance of chromosome protein 3.
  
0.999
Malapachy_2244
Sister chromatid cohesion protein.
   
 0.996
Malapachy_0079
Cohesin-associated protein pds5.
   
 0.986
Malapachy_1071
Serine/threonine-protein kinase.
   
 0.982
Malapachy_1470
Dna polymerase eta.
   
 0.974
Malapachy_2712
Cysteine-type endopeptidase.
   
 0.961
Malapachy_3069
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.933
Malapachy_2613
Condensin complex subunit 3.
   
 0.927
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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