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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0246Wd40 repeat-like protein. (485 aa)    
Predicted Functional Partners:
Malapachy_2190
Uv-damaged dna-binding protein.
    
 0.998
Malapachy_0179
Cullin 4a; Belongs to the cullin family.
    
 0.991
Malapachy_2918
E3 ubiquitin-protein ligase rbx1.
    
 0.989
Malapachy_2334
Vezatin domain-containing protein.
   
 0.943
Malapachy_0979
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.943
Malapachy_0177
Sepb protein.
   
  
 0.918
Malapachy_0700
Cell division control protein.
   
  
 0.918
Malapachy_3569
Cdc45-like protein.
   
  
 0.887
Malapachy_1092
Exo1-exonuclease which interacts with msh2p.
   
 
 0.855
Malapachy_3289
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
  
 0.823
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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