STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0139Elongation factor 1 alpha-like protein. (784 aa)    
Predicted Functional Partners:
Malapachy_1232
RNase_PH domain-containing protein.
    
 0.994
Malapachy_0802
Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
 
 0.990
Malapachy_1029
Rnb-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 0.982
Malapachy_1603
Uncharacterized protein.
    
 0.976
Malapachy_3951
Csl4-exosome core component.
    
 0.974
Malapachy_2497
Exosome complex exonuclease rrp40.
    
 0.969
Malapachy_2797
Exosome complex exonuclease rrp4.
    
 0.968
Malapachy_3462
RNase_PH domain-containing protein.
    
 0.968
Malapachy_2398
Uncharacterized protein.
   
 0.967
Malapachy_0455
Ssd1 protein.
   
 0.941
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.