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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3455Non-histone chromosomal protein 6. (97 aa)    
Predicted Functional Partners:
Malapachy_1344
Histone H2A; Belongs to the histone H2A family.
   
 0.928
Malapachy_1940
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.827
Malapachy_3593
Fact complex subunit spt16.
   
 0.824
Malapachy_3978
Act1-actin; Belongs to the actin family.
   
 0.805
Malapachy_1244
Chromatin remodeling complex subunit; Belongs to the actin family.
    
 0.801
Malapachy_3072
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.795
Malapachy_1256
Tfb1-subunit of rna polymerase ii transcription initiation factor tfiih.
    
 0.791
Malapachy_2147
Rpa49-49 kd subunit of dna-directed rna polymerase i.
    
 0.785
Malapachy_0804
Transcription factor tfb4.
    
 0.783
Malapachy_1287
Dna repair helicase rad25.
   
 0.783
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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