Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4163Uncharacterized protein. (538 aa)    
Predicted Functional Partners:
Malapachy_1071
Serine/threonine-protein kinase.
    
 0.751
Malapachy_1337
Microtubule associated protein.
    
 0.734
Malapachy_0986
Cdc31-spindle pole body centrin.
    
 0.727
Malapachy_0417
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.705
Malapachy_1952
Dynein intermediate chain.
    
 0.690
Malapachy_2148
Uncharacterized protein.
    
 0.688
Malapachy_1360
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.675
Malapachy_3722
Ankyrin repeat protein.
    
 0.656
Malapachy_2066
Calmodulin; Belongs to the calmodulin family.
    
 0.635
Malapachy_0202
Myosin regulatory light chain cdc4.
    
 0.635
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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