Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Malapachy_0024 | Malapachy_0118 | A0A0M8MJ62 | A0A0M8MTX8 | ARID domain-containing protein. | Swi snf complex 60 kDa subunit. | 0.883 |
Malapachy_0024 | Malapachy_1165 | A0A0M8MJ62 | A0A0M8MVP0 | ARID domain-containing protein. | Rsc complex member. | 0.584 |
Malapachy_0024 | Malapachy_1238 | A0A0M8MJ62 | A0A0M8MVS1 | ARID domain-containing protein. | Swi snf complex protein. | 0.883 |
Malapachy_0024 | Malapachy_1925 | A0A0M8MJ62 | A0A0M9VNS6 | ARID domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.721 |
Malapachy_0024 | Malapachy_2300 | A0A0M8MJ62 | A0A0M8MX96 | ARID domain-containing protein. | Rsc complex protein. | 0.584 |
Malapachy_0024 | Malapachy_3359 | A0A0M8MJ62 | A0A0M8MZ90 | ARID domain-containing protein. | Uncharacterized protein. | 0.867 |
Malapachy_0024 | Malapachy_3555 | A0A0M8MJ62 | A0A0M8MYS8 | ARID domain-containing protein. | Snf2-family atp dependent chromatin remodeling factor snf21. | 0.930 |
Malapachy_0024 | Malapachy_3978 | A0A0M8MJ62 | A0A0M8MLT8 | ARID domain-containing protein. | Act1-actin; Belongs to the actin family. | 0.676 |
Malapachy_0024 | Malapachy_4156 | A0A0M8MJ62 | A0A0M8MP34 | ARID domain-containing protein. | Snf5-domain-containing protein; Belongs to the universal ribosomal protein uS2 family. | 0.957 |
Malapachy_0118 | Malapachy_0024 | A0A0M8MTX8 | A0A0M8MJ62 | Swi snf complex 60 kDa subunit. | ARID domain-containing protein. | 0.883 |
Malapachy_0118 | Malapachy_1165 | A0A0M8MTX8 | A0A0M8MVP0 | Swi snf complex 60 kDa subunit. | Rsc complex member. | 0.944 |
Malapachy_0118 | Malapachy_1238 | A0A0M8MTX8 | A0A0M8MVS1 | Swi snf complex 60 kDa subunit. | Swi snf complex protein. | 0.996 |
Malapachy_0118 | Malapachy_1925 | A0A0M8MTX8 | A0A0M9VNS6 | Swi snf complex 60 kDa subunit. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.946 |
Malapachy_0118 | Malapachy_2300 | A0A0M8MTX8 | A0A0M8MX96 | Swi snf complex 60 kDa subunit. | Rsc complex protein. | 0.936 |
Malapachy_0118 | Malapachy_2615 | A0A0M8MTX8 | A0A0M9VQF3 | Swi snf complex 60 kDa subunit. | Irf-2-binding protein celtix-1. | 0.965 |
Malapachy_0118 | Malapachy_3359 | A0A0M8MTX8 | A0A0M8MZ90 | Swi snf complex 60 kDa subunit. | Uncharacterized protein. | 0.819 |
Malapachy_0118 | Malapachy_3555 | A0A0M8MTX8 | A0A0M8MYS8 | Swi snf complex 60 kDa subunit. | Snf2-family atp dependent chromatin remodeling factor snf21. | 0.992 |
Malapachy_0118 | Malapachy_3978 | A0A0M8MTX8 | A0A0M8MLT8 | Swi snf complex 60 kDa subunit. | Act1-actin; Belongs to the actin family. | 0.987 |
Malapachy_0118 | Malapachy_4156 | A0A0M8MTX8 | A0A0M8MP34 | Swi snf complex 60 kDa subunit. | Snf5-domain-containing protein; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
Malapachy_1165 | Malapachy_0024 | A0A0M8MVP0 | A0A0M8MJ62 | Rsc complex member. | ARID domain-containing protein. | 0.584 |
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