STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3112Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
Malapachy_3665
Uncharacterized protein.
   
 0.999
Malapachy_0591
Sentrin-specific protease 1.
   
 0.981
Malapachy_2837
Wd40 repeat-like protein.
   
 0.962
Malapachy_0062
Wd40 repeat-like protein.
   
 0.761
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.752
Malapachy_0882
RIX1 domain-containing protein.
   
 0.745
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.744
Malapachy_1835
Cdc20-cell division control protein.
   
 0.731
Malapachy_3856
Wd40 repeat-like protein.
   
 0.731
Malapachy_1815
F-box-like wd repeat-containing protein tbl1xr1-like protein.
   
 0.731
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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