STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4149Transport protein uso1. (988 aa)    
Predicted Functional Partners:
Malapachy_3142
Gtp-binding protein ypt1.
   
 0.995
Malapachy_2759
Integral membrane protein sed5; Belongs to the syntaxin family.
    
 0.988
Malapachy_0894
Uncharacterized protein.
    
 0.986
Malapachy_3299
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.981
Malapachy_0763
Uncharacterized protein.
    
 0.972
Malapachy_1651
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.901
Malapachy_2968
Golgi reassembly stacking protein 2.
   
 0.898
Malapachy_0560
Snare protein ykt6; Belongs to the synaptobrevin family.
   
 0.848
Malapachy_3151
Sec7 domain-containing protein.
   
 0.845
Malapachy_2699
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.831
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.