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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2424Tyrosine--tRNA ligase. (516 aa)    
Predicted Functional Partners:
Malapachy_1482
Tyrosine--tRNA ligase.
    
 0.924
Malapachy_0922
Nedd8 activating enzyme.
    
 0.896
Malapachy_0670
Methionyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.777
Malapachy_0091
Tryptophan synthase.
  
  
 0.771
Malapachy_2808
Methionyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.768
Malapachy_0615
Arginyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.766
Malapachy_1138
Glycyl-trna synthetase.
  
  
 0.743
Malapachy_2471
Leucine-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.741
Malapachy_3580
Isoleucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.725
Malapachy_2365
Isoleucine-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.725
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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