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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2159ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (672 aa)    
Predicted Functional Partners:
Malapachy_2519
NADPH:adrenodoxin oxidoreductase, mitochondrial.
   
 
  0.665
Malapachy_1770
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
  
0.637
Malapachy_3761
Argininosuccinate synthase.
    
 0.637
Malapachy_3588
Nadph-dependent glutamate synthase.
   
 
 0.629
Malapachy_3599
Threonine aldolase.
    
  0.617
Malapachy_3346
Argininosuccinate lyase.
     
 0.616
Malapachy_0659
Glutamine synthetase; Belongs to the glutamine synthetase family.
     
 0.615
Malapachy_3030
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.613
Malapachy_3900
Plp-dependent transferase.
     
 0.610
Malapachy_4189
Serine-type endopeptidase; Belongs to the peptidase S8 family.
   
 
  0.603
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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