STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4056Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
Malapachy_3813
Arl3p.
    
 0.780
Malapachy_2355
Uncharacterized protein.
    
 0.725
Malapachy_1363
Adp-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.675
Malapachy_0304
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
  0.635
Malapachy_1707
Ras-like protein rab-6a.
    
 0.607
Malapachy_2742
Conserved oligomeric golgi complex subunit 8.
    
  0.559
Malapachy_2123
Arf sar; Belongs to the small GTPase superfamily. Arf family.
    
  0.553
Malapachy_3612
Arf sar family protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.553
Malapachy_2922
Arf-like gtpase.
    
  0.552
Malapachy_0571
Ric1-domain-containing protein.
    
  0.483
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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