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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2089Nucleotide exchange factors-like protein. (349 aa)    
Predicted Functional Partners:
Malapachy_0736
Elongation factor 3.
   
 
 0.990
Malapachy_3081
Mrna export factor elf1.
   
 
 0.990
Malapachy_1592
60s ribosomal protein l23; Belongs to the universal ribosomal protein uL23 family.
  
 0.973
Malapachy_2223
60s ribosomal protein l5.
  
 0.973
Malapachy_0913
60s ribosomal protein l7.
  
 0.972
Malapachy_2628
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.962
Malapachy_2107
Heat shock protein; Belongs to the heat shock protein 70 family.
   
 0.962
Malapachy_1193
60s ribosomal protein l21.
  
 0.957
Malapachy_0010
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.954
Malapachy_3836
60s ribosomal protein l35.
  
 0.950
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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