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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4037Flap endonuclease gen-like protein 1. (582 aa)    
Predicted Functional Partners:
Malapachy_0058
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.880
Malapachy_1481
Dna replication helicase.
   
 0.848
Malapachy_1770
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.843
Malapachy_2334
Vezatin domain-containing protein.
   
 0.840
Malapachy_0979
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.840
Malapachy_3720
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.836
Malapachy_1256
Tfb1-subunit of rna polymerase ii transcription initiation factor tfiih.
    
 0.831
Malapachy_0668
Dna polymerase small subunit.
   
 0.806
Malapachy_1287
Dna repair helicase rad25.
    
 0.804
Malapachy_2012
Crossover junction endonuclease mus81.
   
 0.799
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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