STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1216Aconitase homoaconitase. (201 aa)    
Predicted Functional Partners:
Malapachy_0201
Manganese superoxide dismutase.
   
 
 0.936
Malapachy_0214
50s ribosomal protein l19.
   
 
 0.930
Malapachy_0555
Mrps8-mitochondrial ribosomal small subunit.
   
 
 0.929
Malapachy_1968
Ribosomal protein l15.
   
 
 0.928
Malapachy_2967
50s ribosomal protein l34.
   
 
 0.918
Malapachy_4096
Putative mitochondrial ribosomal protein s21.
   
   0.916
Malapachy_3906
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.915
Malapachy_1102
60s ribosomal protein mitochondrial.
   
 
 0.914
Malapachy_2891
Putative mitochondrial ribosomal protein.
   
 
 0.913
Malapachy_3584
MRP-L46 domain-containing protein.
   
   0.912
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.