STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3402Cdc4 and related f-box and wd-40 protein. (910 aa)    
Predicted Functional Partners:
Malapachy_2157
Scf complex member cullin 1; Belongs to the cullin family.
    
 0.902
Malapachy_1924
Negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.897
Malapachy_2676
Uncharacterized protein.
    
 0.897
Malapachy_2918
E3 ubiquitin-protein ligase rbx1.
    
 0.872
Malapachy_2073
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.820
Malapachy_1932
Mitochondrial 54s ribosomal protein rml2.
    
 0.805
Malapachy_0685
Uncharacterized protein.
    
  0.779
Malapachy_1747
Nedd8-ubiquitin-like protein.
    
 0.778
Malapachy_3141
60s ribosomal protein l2.
    
 0.761
Malapachy_2668
Boi1-bem1 protein-binding protein.
    
 0.759
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.