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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2121Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (221 aa)    
Predicted Functional Partners:
Malapachy_4259
Hcp-like protein.
   
 0.999
Malapachy_1693
Uncharacterized protein.
   
 0.996
Malapachy_3064
Uncharacterized protein.
    
 0.989
Malapachy_0914
Valosin-containing protein; Belongs to the AAA ATPase family.
   
 0.981
Malapachy_2248
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
  
 
0.967
Malapachy_1713
Uncharacterized protein.
   
 
 0.964
Malapachy_3834
MPN domain-containing protein.
    
 
 0.963
Malapachy_3509
Uncharacterized protein.
   
 
 0.939
Malapachy_1176
Peroxisome biosynthesis protein pas1 (Peroxin-1).
   
 0.931
Malapachy_1466
Dna-binding protein.
    
 0.848
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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