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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2784Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (450 aa)    
Predicted Functional Partners:
Malapachy_1815
F-box-like wd repeat-containing protein tbl1xr1-like protein.
   
 0.910
Malapachy_1335
Transcription regulatory protein.
   
 0.905
Malapachy_2029
Putative set3 histone deacetylase complex component snt1p.
    
 0.897
Malapachy_2577
Mrg-domain-containing protein.
    
 0.879
Malapachy_2304
Saga complex subunit hfi1.
    
 0.811
Malapachy_0244
Snf5-domain-containing protein.
   
 0.809
Malapachy_1925
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.804
Malapachy_1344
Histone H2A; Belongs to the histone H2A family.
   
 0.798
Malapachy_0811
Histone h2b; Belongs to the histone H2B family.
    
 0.788
Malapachy_3555
Snf2-family atp dependent chromatin remodeling factor snf21.
   
 0.769
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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