STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2885Nif-domain-containing protein. (280 aa)    
Predicted Functional Partners:
Malapachy_1356
LNS2 domain-containing protein.
    
 0.935
Malapachy_0376
Transcription factor tfiif complex alpha subunit tfg1.
    
 0.867
Malapachy_0510
Spo7 domain-containing protein.
    
 0.838
Malapachy_0509
Uncharacterized protein.
    
 0.838
Malapachy_1996
Tim17-domain-containing protein.
    
 0.789
Malapachy_1201
Rna polymerase ii subunit.
    
 0.777
Malapachy_0086
Nadh-ubiquinone oxidoreductase kDa subunit.
   
 0.774
Malapachy_1226
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
  
 0.767
Malapachy_2845
Uncharacterized protein.
    
 0.764
Malapachy_1776
Nitroreductase family protein.
    
 0.764
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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