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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2570Atp-binding cassette transporter. (630 aa)    
Predicted Functional Partners:
Malapachy_2706
Rnase l inhibitor-type atp binding cassette protein.
   
 
0.926
Malapachy_3081
Mrna export factor elf1.
   
 
0.840
Malapachy_0736
Elongation factor 3.
   
 
0.805
Malapachy_3653
Eukaryotic translation initiation factor 5b.
   
 
 0.779
Malapachy_3331
Translation initiation factor eif2 gamma subunit.
   
 0.729
Malapachy_1592
60s ribosomal protein l23; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.725
Malapachy_0320
40s ribosomal protein s3.
   
   0.724
Malapachy_2628
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.722
Malapachy_0289
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.719
Malapachy_2223
60s ribosomal protein l5.
   
 
 0.718
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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