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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2525Saccharopine dehydrogenase; Belongs to the spermidine/spermine synthase family. (767 aa)    
Predicted Functional Partners:
Malapachy_2795
Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.
 
 
 
 0.971
Malapachy_0855
Alpha-aminoadipate reductase lys1p.
  
 
 0.962
Malapachy_0618
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.955
Malapachy_2762
S-adenosylmethionine decarboxylase proenzyme.
     
 0.936
Malapachy_0153
Isocitrate dehydrogenase.
   
  
 0.759
Malapachy_1262
Uncharacterized protein.
    
 0.695
Malapachy_2319
Agmatinase; Belongs to the arginase family.
    
 0.695
Malapachy_4210
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
  
 0.643
Malapachy_2218
Aspartate-semialdehyde dehydrogenase.
   
 
 0.621
Malapachy_0091
Tryptophan synthase.
  
  
 0.586
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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