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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0262Rrna processing protein rrp8. (996 aa)    
Predicted Functional Partners:
Malapachy_3702
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.939
Malapachy_3343
Karyopherin kap95.
    
   0.939
Malapachy_2803
Brix domain-containing protein.
   
   0.920
Malapachy_1562
Rna-binding domain-containing protein.
   
   0.903
Malapachy_1314
Nop15-protein involved in 60s ribosomal subunit biogenesis.
   
   0.897
Malapachy_2703
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.892
Malapachy_2689
Uncharacterized protein.
   
 
 0.878
Malapachy_2428
Ribosome biogenesis protein brx1.
   
   0.876
Malapachy_0536
Uncharacterized protein.
   
   0.850
Malapachy_3391
Noc2-domain-containing protein.
   
 
 0.837
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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