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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3333Pep12 syntaxin (T-snare) vacuolar; Belongs to the syntaxin family. (293 aa)    
Predicted Functional Partners:
Malapachy_3818
Vesicle transport v-snare protein vti1.
   
 0.991
Malapachy_0560
Snare protein ykt6; Belongs to the synaptobrevin family.
   
 0.990
Malapachy_1526
Synaptobrevin.
   
 0.984
Malapachy_4181
Vesicular-fusion protein sec17.
    
 0.978
Malapachy_2783
Vamp synaptobrevin-like protein; Belongs to the synaptobrevin family.
   
 0.975
Malapachy_2544
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.974
Malapachy_3185
Atp binding protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.972
Malapachy_0016
Protein transporter sec9.
    
 0.971
Malapachy_0763
Uncharacterized protein.
   
 0.971
Malapachy_2095
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.971
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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