STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3666Trna guanosine-2-o-methyltransferase. (492 aa)    
Predicted Functional Partners:
Malapachy_2420
Uncharacterized protein.
   
 0.973
Malapachy_1583
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
 
      0.855
Malapachy_0877
Nad-dependent histone deacetylase.
    
 0.799
Malapachy_0770
Utp21-domain-containing protein.
   
    0.785
Malapachy_0931
Sir2-domain-containing protein.
    
 0.734
Malapachy_1476
Gcd14-translational repressor of gcn4.
   
  
 0.713
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.704
Malapachy_3115
Trna (Guanine-n7-)-methyltransferase subunit trm82.
   
  
 0.691
Malapachy_1671
Arm repeat-containing protein.
   
    0.660
Malapachy_2803
Brix domain-containing protein.
   
    0.656
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.