STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0123Tbc domain protein. (415 aa)    
Predicted Functional Partners:
Malapachy_3327
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.803
Malapachy_1707
Ras-like protein rab-6a.
   
 
 0.661
Malapachy_1826
Type a von willebrand factor and atpase domain containing protein.
   
 
 0.628
Malapachy_2444
Uncharacterized protein.
   
 
 0.628
Malapachy_3117
Peroxin-3 protein.
      
 0.468
Malapachy_4227
Gyp1-gtpase activating protein.
    
 
0.442
Malapachy_0933
Grd19 involved in retrieval of late golgi membrane protein from the prevacuolar compartment.
    
 
 0.413
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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