STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1587Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (578 aa)    
Predicted Functional Partners:
Malapachy_3711
Cleavage and polyadenylation specificity factor.
    
 0.996
Malapachy_3217
Fip1 domain-containing protein.
   
 0.996
Malapachy_0649
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.995
Malapachy_0442
Cleavage and polyadenylation specificity protein.
    
 0.991
Malapachy_0130
Cleavage and polyadenylation specificity factor.
    
 0.989
Malapachy_2072
Metallo-hydrolase oxidoreductase.
   
 0.989
Malapachy_0062
Wd40 repeat-like protein.
   
 0.987
Malapachy_1857
Mrna 3-end-processing protein rna14.
    
 0.974
Malapachy_3224
Rna-binding protein.
    
 0.971
Malapachy_3023
Dwnn-domain-containing protein.
    
 
 0.966
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.