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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1914Snf2 chromatin remodeling protein. (1816 aa)    
Predicted Functional Partners:
Malapachy_2313
Tbp-domain-containing protein.
    
 
 0.990
Malapachy_2583
Dna polymerase epsilon subunit dpb3.
    
 
 0.904
Malapachy_1149
Histone-fold-containing protein.
    
 
 0.892
Malapachy_1950
Pab-dependent poly-specific ribonuclease subunit pan2.
 
      0.745
Malapachy_1247
Hsp90-like protein.
 
      0.735
Malapachy_3342
Chromatin remodelling complex atpase chain isw1.
  
 
0.633
Malapachy_1486
Taf2-component of tfiid complex.
   
  
 0.597
Malapachy_2523
Spt3-general transcriptional adaptor or co-activator.
    
 
 0.590
Malapachy_0592
Phd zn-finger protein.
   
 
 0.555
Malapachy_0762
Lymphoid-specific helicase-like protein.
  
 
0.552
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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