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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0101Phf5-like protein. (71 aa)    
Predicted Functional Partners:
Malapachy_2264
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.998
Malapachy_2514
Splicing factor 3b subunit 1.
   
 0.998
Malapachy_2278
PSP domain-containing protein.
    
 0.998
Malapachy_1620
L domain-like protein.
   
 0.998
Malapachy_1868
Uncharacterized protein.
   
 0.998
Malapachy_3559
Spliceosome-associated protein sap-49.
    
 0.998
Malapachy_1872
Splicing factor 3b subunit 3.
   
 0.998
Malapachy_3251
Rna-binding domain-containing protein.
   
 0.997
Malapachy_2536
Splicing factor 3a subunit 2.
    
 0.994
Malapachy_2927
Small nuclear ribonucleoprotein G.
   
 0.994
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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