STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1736Rrp6-exonuclease component of the nuclear exosome. (842 aa)    
Predicted Functional Partners:
Malapachy_1029
Rnb-domain-containing protein; Belongs to the RNR ribonuclease family.
    
 0.973
Malapachy_1232
RNase_PH domain-containing protein.
    
  0.964
Malapachy_1813
Kog1-subunit of a rapamycin-sensitive complex involved in growth control.
   
 0.957
Malapachy_3679
Protein ste16.
   
 0.954
Malapachy_1315
Uncharacterized protein.
    
 0.952
Malapachy_1231
Wd repeat protein pop3.
    
 0.952
Malapachy_3787
Ras-related gtp-binding protein a-like protein.
    
 0.935
Malapachy_0993
Gtr1 g protein gtr2.
    
 0.918
Malapachy_3215
Telomere_reg-2 domain-containing protein.
    
 0.906
Malapachy_0236
Apg1-essential for autophagocytosis.
    
 0.897
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.