STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0M8MU63AA_TRNA_LIGASE_II domain-containing protein. (448 aa)    
Predicted Functional Partners:
Malapachy_3137
Seryl-trna synthetase.
  
  
 
0.892
Malapachy_2523
Spt3-general transcriptional adaptor or co-activator.
    
 
 0.854
Malapachy_0219
Rheb gtpase rhb1.
 
    
 0.851
Malapachy_2725
SGF29 C-terminal domain-containing protein.
    
 
 0.845
Malapachy_2362
Histone acetyltransferase gcn5.
    
 
 0.843
Malapachy_1459
Transcription initiation factor tfiid subunit.
    
 
 0.842
Malapachy_1596
Transcription initiation factor tfiid subunit 12.
    
 
 0.842
Malapachy_2032
Uncharacterized protein.
    
 
 0.837
Malapachy_1469
Cysteine proteinase; Belongs to the peptidase C19 family.
    
   0.834
Malapachy_0187
Histone acetylase complex subunit paf400; Belongs to the PI3/PI4-kinase family.
    
 
 0.834
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.