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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4166Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
Malapachy_3396
Heterogeneous nuclear ribonucleoprotein hrp1.
    
 
 0.958
Malapachy_0717
Nuclear cap-binding protein subunit 2.
    
 
 0.945
Malapachy_4180
Arm repeat-containing protein.
    
 
 0.880
Malapachy_0885
Ntf2-like protein.
    
 
 0.806
Malapachy_2757
Yra1-rna annealing protein.
    
 
 0.778
Malapachy_0545
Atp-dependent rna helicase sub2.
    
 
 0.717
Malapachy_1357
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.688
Malapachy_2153
Tho complex subunit.
    
 
 0.677
Malapachy_0736
Elongation factor 3.
    
   0.676
Malapachy_4249
Rna-binding protein.
    
 
 0.604
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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