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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2139Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1082 aa)    
Predicted Functional Partners:
Malapachy_1075
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.996
Malapachy_0069
Essential component of the nuclear pore which mediates nuclear import and export.
   
 0.722
Malapachy_2010
RanBD1 domain-containing protein.
   
 0.722
Malapachy_3680
Essential component of the nuclear pore which mediates nuclear import and export.
   
 0.722
Malapachy_3898
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 
 0.713
Malapachy_3100
Lhp1-rna binding protein.
    
 
 0.702
Malapachy_0670
Methionyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.654
Malapachy_3807
Initiator trna phosphoribosyl transferase.
   
 
 0.650
Malapachy_3110
80 kDa nuclear cap binding protein.
   
  
 0.637
Malapachy_3081
Mrna export factor elf1.
   
 
 0.626
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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