STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2300Rsc complex protein. (592 aa)    
Predicted Functional Partners:
Malapachy_1238
Swi snf complex protein.
   
 0.956
Malapachy_3555
Snf2-family atp dependent chromatin remodeling factor snf21.
   
 0.952
Malapachy_4156
Snf5-domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
    
 0.948
Malapachy_0244
Snf5-domain-containing protein.
    
 0.948
Malapachy_1165
Rsc complex member.
    
 0.946
Malapachy_0118
Swi snf complex 60 kDa subunit.
    
 0.936
Malapachy_3978
Act1-actin; Belongs to the actin family.
   
 0.933
Malapachy_2615
Irf-2-binding protein celtix-1.
   
 0.892
Malapachy_0835
Uncharacterized protein.
    
 0.873
Malapachy_1925
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.864
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.